Esther Cañibano, Clara Bourbousse, Marta García-León, Borja Garnelo Gómez,

Léa Wolff, Camila Garcí-Baudino, Rosa Lozano-Durán, Fredy Barneche, Vicente Rubio*,

and Sandra Fonseca* (2021)

DET1-mediated COP1 regulation avoids HY5 activity over second-site gene targets to tune plant photomorphogenesis.

Molecular Plant 14, 1–20, https://doi.org/10.1016/j.molp.2021.03.009 (*co-corresponding authors)

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Evyatar Steiner, Monica Rojas Triana, Sivan Kubasi, Shula Blum, Javier Paz-Ares,

Vicente Rubio and David Weiss (2021)

KISS ME DEADLY F-box proteins modulate cytokinin responses by targeting the transcription factor TCP14 for degradation. .

Plant Physiology, kiab033, https://doi.org/10.1093/plphys/kiab033

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Klaus D Grasser, Vicente Rubio, Fredy Barneche

 Multifaceted activities of the plant SAGA complex.

2020 Biochim Biophys Acta Gene Regul Mech. Jul 31:194613.

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García-León M, Rubio V.

Biochemical and Imaging Analysis of ALIX Function in Endosomal Trafficking of Arabidopsis Protein Cargoes.

Methods Mol Biol. 2020;2177:49-58. doi: 10.1007/978-1-0716-0767-1_5.PMID: 32632804

 

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Blanco-Touriñán N, Legris M, Minguet EG, Costigliolo-Rojas C, Nohales MA, Iniesto E, García-Leόn M, Pacín M, Heucken N, Blomeier T, Locascio A, Černý M, Esteve-Bruna D, Díez-Díaz M, Brzobohatý B, Frerigmann H, Zurbriggen MD, Kay SA, Rubio V, Blázquez MA, Casal JJ, Alabadí D

COP1 destabilizes DELLA proteins in Arabidopsis.

.Proc Natl Acad Sci U S A. 2020 Jun 16;117(24):13792-13799. doi: 10.1073/pnas.1907969117. Epub 2020 May 29.PMID: 32471952

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Chico JM, Lechner E, Fernandez-Barbero G, Canibano E, García-Casado G, Franco-Zorrilla JM, Hammann P, Zamarreño AM, García-Mina JM, Rubio V, Genschik P, Solano R.

CUL3BPM E3 ubiquitin ligases regulate MYC2, MYC3, and MYC4 stability and JA responses.

Proc Natl Acad Sci U S A. 2020 Mar 2. pii: 201912199. doi: 10.1073/pnas.1912199117. PMID: 32123086

 

Fonseca S, Rubio V.

Arabidopsis CRL4 Complexes: Surveying Chromatin States and Gene Expression.

Front Plant Sci. 2019 Sep 17;10:1095. doi: 10.3389/fpls.2019.01095. eCollection 2019. PMID: 31608079

 

 Ali A, Kim JK, Jan M, Khan HA, Khan IU, Shen M, Park J, Lim CJ, Hussain S, Baek D, Wang K, Chung WS, Rubio V, Lee SY, Gong Z, Kim WY, Bressan RA, Pardo JM, Yun DJ.

Rheostatic control of ABA signaling through HOS15-mediated OST1degradation.

Mol Plant. 2019 Sep 3. pii: S1674-2052(19)30288-6. doi:10.1016/j.molp.2019.08.005. [Epub ahead of print] PubMed PMID: 31491477.

 

García-León M, Cuyas L, El-Moneim DA, Rodriguez L, Belda-Palazón B, Sanchez-Quant E, Fernández Y, Roux B, Zamarreño ÁM, García-Mina JM, Nussaume L, Rodriguez PL, Paz-Ares J, Leonhardt N, Rubio V.

Arabidopsis ALIX Regulates Stomatal Aperture and Turnover of Abscisic Acid Receptors.

Plant Cell. 2019 Oct;31(10):2411-2429. doi: 10.1105/tpc.19.00399. Epub 2019 Jul 30. PubMed PMID:31363038.

 

Medici A, Szponarski W, Dangeville P, Safi A, Dissanayake IM, Saenchai C, Emanuel A, Rubio V, Lacombe B, Ruffel S, Tanurdzic M, Rouached H, Krouk G.

 Identification of Molecular Integrators Shows that Nitrogen Actively Controls the Phosphate Starvation Response in Plants.

Plant Cell. 2019 May;31(5):1171-1184. doi: 10.1105/tpc.18.00656. Epub 2019 Mar 14. PubMed PMID: 30872321; PubMed Central PMCID: PMC6533016.

 

Nassrallah A, Rougée M, Bourbousse C, Drevensek S, Fonseca S, Iniesto E, Ait-Mohamed O, Deton-Cabanillas AF, Zabulon G, Ahmed I, Stroebel D, Masson V, Lombard B, Eeckhout D, Gevaert K, Loew D, Genovesio A, Breyton C, De Jaeger G, Bowler C, Rubio V, Barneche F.

DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis.

Elife. 2018 Sep 7;7. pii: e37892. doi: 10.7554/eLife.37892. PubMed PMID: 30192741; PubMed Central PMCID: PMC6128693.

 

 García-León M, Iniesto E, Rubio V.

 Tandem Affinity Purification of Protein Complexes from Arabidopsis Cell Cultures.

Methods Mol Biol. 2018;1794:297-309. doi: 10.1007/978-1-4939-7871-7_21. PubMed PMID: 29855967.

 

Park J, Lim CJ, Shen M, Park HJ, Cha JY, Iniesto E, Rubio V, Mengiste T, Zhu JK, Bressan RA, Lee SY, Lee BH, Jin JB, Pardo JM, Kim WY, Yun DJ.

Epigenetic switch from repressive to permissive chromatin in response to cold stress.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):E5400-E5409. doi: 10.1073/pnas.1721241115. Epub 2018 May 21. PubMed PMID: 29784800; PubMed Central  PMCID: PMC6003311.

 

Puga MI, Rojas-Triana M, de Lorenzo L, Leyva A, Rubio V, Paz-Ares J.

Novel signals in the regulation of Pi starvation responses in plants: facts and promises.

Curr Opin Plant Biol. 2017 Oct;39:40-49. doi:10.1016/j.pbi.2017.05.007. Epub 2017 Jun 3. Review. PubMed PMID: 28587933.

 

Perea-Resa C, Rodríguez-Milla MA, Iniesto E, Rubio V, Salinas J.

Prefoldins Negatively Regulate Cold Acclimation in Arabidopsis thaliana by Promoting Nuclear Proteasome-Mediated HY5 Degradation.

Mol Plant. 2017 Jun 5;10(6):791-804. doi: 10.1016/j.molp.2017.03.012. Epub 2017 Apr 12. PubMed PMID: 28412546.

 

 

Nagels Durand A, Iñigo S, Ritter A, Iniesto E, De Clercq R, Staes A, VanLeene J, Rubio V, Gevaert K, De Jaeger G, Pauwels L, Goossens A.

The Arabidopsis Iron-Sulfur Protein GRXS17 is a Target of the Ubiquitin E3 Ligases RGLG3 and RGLG4.

Plant Cell Physiol. 2016 Sep;57(9):1801-13. doi: 10.1093/pcp/pcw122. Epub

2016 Aug 6. PubMed PMID: 27497447.

 

Cardona-López X, Cuyas L, Marín E, Rajulu C, Irigoyen ML, Gil E, Puga MI,Bligny R, Nussaume L, Geldner N, Paz-Ares J, Rubio V.

ESCRT-III-Associated Protein ALIX Mediates High-Affinity Phosphate Transporter Trafficking to Maintain Phosphate Homeostasis in Arabidopsis.

Plant Cell. 2015 Sep;27(9):2560-81. doi:10.1105/tpc.15.00393. Epub 2015 Sep 4. PubMed PMID: 26342016; PubMed Central

PMCID: PMC4815105.

 

Kalinowska K, Nagel MK, Goodman K, Cuyas L, Anzenberger F, Alkofer A,Paz-Ares J, Braun P, Rubio V, Otegui MS, Isono E.

Arabidopsis ALIX is required for the endosomal localization of the deubiquitinating enzyme AMSH3.

Proc Natl Acad Sci U S A. 2015 Oct 6;112(40):E5543-51. doi: 10.1073/pnas.1510516112. Epub 2015 Aug 31. PubMed PMID: 26324913; PubMed Central PMCID: PMC4603487.

 

Puga MI, Mateos I, Charukesi R, Wang Z, Franco-Zorrilla JM, de Lorenzo L,Irigoyen ML, Masiero S, Bustos R, Rodríguez J, Leyva A, Rubio V, Sommer H,Paz-Ares J.

SPX1 is a phosphate-dependent inhibitor of Phosphate Starvation Response 1 in Arabidopsis.

Proc Natl Acad Sci U S A. 2014 Oct14;111(41):14947-52. doi: 10.1073/pnas.1404654111. Epub 2014 Sep 30. PubMed PMID:

25271326; PubMed Central PMCID: PMC4205628.

 

Irigoyen ML, Iniesto E, Rodriguez L, Puga MI, Yanagawa Y, Pick E, Strickland E, Paz-Ares J, Wei N, De Jaeger G, Rodriguez PL, Deng XW, Rubio V.

Targeted degradation of abscisic acid receptors is mediated by the ubiquitin ligase substrate adaptor DDA1 in Arabidopsis.

Plant Cell. 2014 Feb;26(2):712-28. doi:10.1105/tpc.113.122234. Epub 2014 Feb 21. PubMed PMID: 24563205; PubMed Central

PMCID: PMC3967035.

 

Iglesias J, Trigueros M, Rojas-Triana M, Fernández M, Albar JP, Bustos R,Paz-Ares J, Rubio V.

Proteomics identifies ubiquitin-proteasome targets and new roles for chromatin-remodeling in the Arabidopsis response to phosphate starvation.

J Proteomics. 2013 Dec 6;94:1-22. doi: 10.1016/j.jprot.2013.08.015.

Epub 2013 Sep 5. PubMed PMID: 24012629.

 

Maier A, Schrader A, Kokkelink L, Falke C, Welter B, Iniesto E, Rubio V,Uhrig JF, Hülskamp M, Hoecker U.

Light and the E3 ubiquitin ligase COP1/SPA control the protein stability of the MYB transcription factors PAP1 and PAP2

involved in anthocyanin accumulation in Arabidopsis.

Plant J. 2013 May;74(4):638-51. doi: 10.1111/tpj.12153. Epub 2013 Mar 25. PubMed PMID:23425305.

 

Rojas-Triana M, Bustos R, Espinosa-Ruiz A, Prat S, Paz-Ares J, Rubio V.

Roles of ubiquitination in the control of phosphate starvation responses in plants(f).

J Integr Plant Biol. 2013 Jan;55(1):40-53. doi: 10.1111/jipb.12017. PubMed PMID:

23206191.

 

Bustos R, Castrillo G, Linhares F, Puga MI, Rubio V, Pérez-Pérez J, Solano R,Leyva A, Paz-Ares J.

A central regulatory system largely controls transcriptional activation and repression responses to phosphate starvation in Arabidopsis.

 PloS Genet. 2010 Sep 9;6(9):e1001102. doi: 10.1371/journal.pgen.1001102. PubMed PMID:

20838596; PubMed Central PMCID: PMC2936532.

 

Rubio V, Deng XW.

The dark side of clock-controlled flowering.

F1000 BiolRep. 2009 Jul 27;1:57. doi: 10.3410/B1-57. PubMed PMID: 20948627; PubMed Central

PMCID: PMC2948263.

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